STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI35350.1PPIase cyclophilin-type domain-containing protein. (426 aa)    
Predicted Functional Partners:
SSCI07200.1
Uncharacterized protein.
    
 0.947
SSCI67690.1
Uncharacterized protein.
    
 0.945
SSCI06790.1
Probable transcriptional coregulator Snw1.
    
 0.943
SSCI40110.1
Probable CDC40-Pre-mRNA splicing factor important for catalytic step II.
   
 0.943
SSCI04690.1
MI domain-containing protein.
    
 0.935
SSCI53030.1
PWI domain-containing protein.
    
 0.931
SSCI16830.1
Probable PRP2-RNA-dependent ATPase of DEAH box family.
   
 0.912
SSCI17660.1
Uncharacterized protein.
    
 0.902
SSCI35580.1
MPN domain-containing protein.
   
 0.895
SSCI00290.1
MFAP1 domain-containing protein.
   
  0.892
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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