STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI03310.1GFO_IDH_MocA domain-containing protein. (430 aa)    
Predicted Functional Partners:
SSCI33530.1
Rit1_C domain-containing protein.
 
      0.889
SSCI07070.1
MR_MLE domain-containing protein.
     
 0.798
SSCI77190.1
Related to GAL1-galactokinase.
  
 0.737
SSCI52690.1
Zn(2)-C6 fungal-type domain-containing protein.
    
  0.717
SSCI75560.1
MAGE domain-containing protein.
   
 
  0.681
SSCI64910.1
ArabFuran-catal domain-containing protein.
    
  0.680
SSCI04700.1
CTP_transf_like domain-containing protein.
     
 0.616
SSCI21940.1
Aspartate semialdehyde dehydrogenase.
   
 
  0.600
SSCI64290.1
Probable PHO81-cyclin-dependent kinase inhibitor.
  
  0.589
SSCI09110.1
Lysine--tRNA ligase.
  
    0.555
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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