STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI28740.1Probable PEP4-aspartyl protease; Belongs to the peptidase A1 family. (419 aa)    
Predicted Functional Partners:
SSCI43290.1
Uncharacterized protein.
   
 0.731
SSCI37980.1
Uncharacterized protein.
     
 0.583
SSCI64580.1
Probable KEX2-endoproteinase of late golgi compartment; Belongs to the peptidase S8 family.
    
 0.536
SSCI48300.1
Related to carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.466
SSCI59460.1
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.466
SSCI09850.1
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.466
SSCI70960.1
Probable Alpha-L-arabinofuranosidase.
    
 
 0.447
SSCI34320.1
Probable PRB1-protease B, vacuolar; Belongs to the peptidase S8 family.
    
 0.442
SSCI67780.1
Uncharacterized protein.
    
  0.435
SSCI03380.1
tRNA dimethylallyltransferase.
     
 0.433
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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