STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI39480.1Uncharacterized protein. (259 aa)    
Predicted Functional Partners:
SSCI05940.1
Related to DRAP deaminase RIB2.
    
 
 0.912
SSCI78190.1
Related to MRPL10-mitochondrial ribosomal protein, large subunit.
   
   0.882
SSCI85740.1
Probable MRPL23-mitochondrial ribosomal protein, large subunit.
   
   0.879
SSCI45200.1
G domain-containing protein.
   
   0.878
SSCI23940.1
Related to mitochondrial ribosomal protein YmL8; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.873
SSCI32270.1
Related to MSS1-mitochondrial GTPase involved in expression of COX1.
   
   0.866
SSCI32040.1
Ribosomal_L11 domain-containing protein.
   
   0.865
SSCI86470.1
Related to MRPL51-mitochondrial ribosomal protein, large subunit.
   
   0.865
SSCI23930.1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
   0.864
SSCI02100.1
Related to MRPL9-mitochondrial ribosomal protein, large subunit.
    
   0.864
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.