STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI34750.1Related to Deoxyribodipyrimidine photo-lyase. (881 aa)    
Predicted Functional Partners:
SSCI09320.1
Probable casein kinase-1 hhp1; Belongs to the protein kinase superfamily.
    
 0.849
SSCI43750.1
Related to TOF1-topoisomerase I interacting factor 1.
    
 0.841
SSCI32390.1
Uncharacterized protein.
    
 0.763
SSCI67510.1
JmjC domain-containing protein.
    
 0.704
SSCI32150.1
Related to GRR1-required for glucose repression and for glucose and cation transport.
    
 0.686
SSCI45640.1
Uncharacterized protein.
    
 0.680
SSCI16340.1
Uncharacterized protein.
    
 0.676
SSCI16330.1
Uncharacterized protein.
    
 0.676
SSCI63500.1
Related to RAD7-nucleotide excision repair protein.
    
 0.676
SSCI76940.1
Uncharacterized protein.
    
 0.676
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.