STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI08170.1Related to SPS19-peroxisomal 2,4-dienoyl-CoA reductase. (301 aa)    
Predicted Functional Partners:
SSCI62820.1
Uncharacterized protein.
  
 0.691
SSCI62790.1
PKS_AT domain-containing protein.
  
 0.691
SSCI31120.1
MaoC-like domain-containing protein.
   
0.668
SSCI77430.1
Related to Malonyl CoA-acyl carrier protein transacylase.
  
 0.663
SSCI76090.1
Uncharacterized protein.
    
 0.653
SSCI14160.1
Uncharacterized protein.
    
 0.642
SSCI25420.1
Related to Peroxisome assembly protein 12.
    
  0.620
SSCI19520.1
Probable stearoyl-CoA desaturase.
   
 0.605
SSCI14400.1
Probable POT1-acetyl-CoA C-acyltransferase, peroxisomal; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.599
SSCI36160.1
Uncharacterized protein.
   
 0.599
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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