STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI52680.1Fungal_trans domain-containing protein. (654 aa)    
Predicted Functional Partners:
SSCI38010.1
Uncharacterized protein.
   
 0.990
SSCI31490.1
Related to nuclear matrix protein p84.
   
 0.990
SSCI04360.1
Uncharacterized protein.
   
 0.988
SSCI10090.1
Related to CEF1-required during G2/M transition.
   
 
 0.985
SSCI21030.1
WD_REPEATS_REGION domain-containing protein.
    
 0.968
SSCI73960.1
Uncharacterized protein.
    
 0.968
SSCI13810.1
Related to 80 kDa nuclear cap binding protein.
    
 0.965
SSCI18320.1
Uncharacterized protein.
   
 0.960
SSCI16830.1
Probable PRP2-RNA-dependent ATPase of DEAH box family.
   
 0.960
SSCI20710.1
Uncharacterized protein.
   
 0.956
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.