STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI54270.1Uncharacterized protein. (874 aa)    
Predicted Functional Partners:
SSCI55430.1
Spindle pole body component.
    
 0.833
SSCI41160.1
Uncharacterized protein.
   
 0.794
SSCI66880.1
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.755
SSCI75990.1
Spindle pole body component.
    
 0.741
SSCI64930.1
Spindle pole body component.
    
 0.735
SSCI26340.1
Uncharacterized protein.
    
 0.710
SSCI19020.1
Uncharacterized protein.
    
 0.710
SSCI19570.1
Spindle pole body component.
    
 0.710
SSCI20320.1
Uncharacterized protein.
    
 0.710
SSCI58000.1
Uncharacterized protein.
    
 0.666
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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