STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI27190.1Uncharacterized protein. (237 aa)    
Predicted Functional Partners:
SSCI67690.1
Uncharacterized protein.
     
 0.956
SSCI70470.1
Probable mrna export factor elf1.
    
   0.867
SSCI04810.1
Probable YEF3-translation elongation factor eEF3.
    
 
 0.851
SSCI07990.1
Related to GLE1-RNA export mediator.
    
 0.846
SSCI79940.1
Related to anti-silencing protein 1.
    
 0.788
SSCI44230.1
Ubiquitin-like domain-containing protein.
   
  0.748
SSCI05380.1
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.739
SSCI15630.1
Probable RPS22A-ribosomal protein S15a.e.c10, cytosolic; Belongs to the universal ribosomal protein uS8 family.
   
 
 0.730
SSCI71190.1
Related to MRPS8-mitochondrial ribosomal protein, small subunit.
   
 
 0.730
SSCI77820.1
Uncharacterized protein.
   
 
 0.714
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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