STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI27240.1Related to soluble epoxide hydrolase. (395 aa)    
Predicted Functional Partners:
SSCI83990.1
Uncharacterized protein.
  
 
 0.972
SSCI14160.1
Uncharacterized protein.
   
 0.963
SSCI76090.1
Uncharacterized protein.
   
 0.963
SSCI25420.1
Related to Peroxisome assembly protein 12.
   
 
  0.960
SSCI86590.1
Related to peroxisomal membrane protein pex13.
    
 0.959
SSCI29380.1
Related to PEX14-peroxisomal protein involved in protein import-peroxin.
   
 
  0.957
SSCI10550.1
Uncharacterized protein.
   
 
 0.956
SSCI31580.1
Probable ubiquitin.
   
 
  0.955
SSCI70680.1
Uncharacterized protein.
   
 
  0.955
SSCI31900.1
Probable ubiquitin/ribosomal protein S27a fusion protein.
   
 
  0.955
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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