STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI18040.1BZIP domain-containing protein. (484 aa)    
Predicted Functional Partners:
SSCI19520.1
Probable stearoyl-CoA desaturase.
     
 0.782
SSCI64300.1
Importin N-terminal domain-containing protein.
    
 
 0.731
SSCI69060.1
Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.
   
 0.711
SSCI61750.1
Uncharacterized protein.
   
 0.711
SSCI61760.1
Uncharacterized protein.
   
 0.711
SSCI49590.1
Uncharacterized protein; Belongs to the SKP1 family.
    
 
 0.684
SSCI70000.1
Uncharacterized protein.
   
 0.675
SSCI81860.1
BZIP domain-containing protein.
    
 
 0.669
SSCI24860.1
Related to SKN7-transcription factor.
   
 
 0.633
SSCI59640.1
Elongation of fatty acids protein.
    
 0.579
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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