STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI70630.1Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (492 aa)    
Predicted Functional Partners:
SSCI15570.1
Ribosomal_L14e domain-containing protein.
   
 
 0.635
SSCI24410.1
Related to 60S ribosomal protein L28.
   
   0.601
SSCI71390.1
Probable ribosomal protein L13B.
   
   0.600
SSCI43130.1
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 
 0.600
SSCI63480.1
Probable 40s ribosomal protein S13.e; Belongs to the universal ribosomal protein uS15 family.
   
   0.599
SSCI70580.1
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 
 0.597
SSCI02340.1
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
   0.594
SSCI75970.1
Probable 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
   0.594
SSCI77820.1
Uncharacterized protein.
   
   0.592
SSCI38650.1
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
   0.592
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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