STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI31830.1Uncharacterized protein. (689 aa)    
Predicted Functional Partners:
SSCI86230.1
Related to GTPase-activating protein beta-chimerin.
    
0.898
SSCI31840.1
Uncharacterized protein.
 
  
 0.836
SSCI66420.1
Uncharacterized protein.
    
 0.823
SSCI44880.1
Probable Rho2-GTP binding protein Rho2.
    
 0.810
SSCI03150.1
Uncharacterized protein.
   
 
 0.802
SSCI10200.1
GTP binding protein Rac1.
   
 0.792
SSCI58140.1
Related to GTPase-activating protein of the rho/rac family (LRG1 protein).
    
0.780
SSCI16720.1
Probable GTPase Rho1.
    
 0.778
SSCI25440.1
GTP binding protein Cdc42.
   
 0.771
SSCI18650.1
Uncharacterized protein.
   
0.724
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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