STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI75230.1SMP-LTD domain-containing protein. (453 aa)    
Predicted Functional Partners:
SSCI75210.1
C2 domain-containing protein.
 
     0.949
SSCI75200.1
Uncharacterized protein.
 
      0.879
SSCI75220.1
Uncharacterized protein.
 
     0.678
SSCI44390.1
Uncharacterized protein.
    
 0.676
SSCI53820.1
Probable clathrin-associated adaptor complex medium chain; Belongs to the adaptor complexes medium subunit family.
    
 0.639
SSCI64290.1
Probable PHO81-cyclin-dependent kinase inhibitor.
    
 0.612
SSCI77900.1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
  0.596
SSCI03150.1
Uncharacterized protein.
    
 0.584
SSCI46970.1
DH domain-containing protein.
    
 0.558
SSCI57020.1
Related to EDE1 protein involved in endocytosis.
    
 0.558
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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