STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI31680.1Uncharacterized protein. (793 aa)    
Predicted Functional Partners:
SSCI58790.1
Lysophospholipase.
   
 
 0.818
SSCI31690.1
Uncharacterized protein.
 
      0.759
SSCI31500.1
Probable aspartate aminotransferase, cytoplasmic.
    
 0.629
SSCI47120.1
Aspartate aminotransferase.
    
 0.620
SSCI59930.1
Related to SBA1-Hsp90 associated co-chaperone.
     
 0.618
SSCI38700.1
annotation not available
     
 0.580
SSCI13320.1
MFS domain-containing protein.
   
 
 0.522
SSCI72820.1
Uncharacterized protein.
   
 
 0.522
SSCI47830.1
Uncharacterized protein.
     
 0.493
SSCI07650.1
GST_C domain-containing protein.
     
 0.493
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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