STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI77940.1Uncharacterized protein. (405 aa)    
Predicted Functional Partners:
SSCI59490.1
Uncharacterized protein.
   
 
 0.867
SSCI62420.1
Related to 50S ribosomal protein L19.
   
 
 0.812
SSCI02100.1
Related to MRPL9-mitochondrial ribosomal protein, large subunit.
   
   0.809
SSCI07890.1
Related to 50S ribosomal protein L4.
   
 
 0.802
SSCI05020.1
Uncharacterized protein.
   
   0.772
SSCI57130.1
Related to MRPL16-mitochondrial ribosomal protein, large subunit; Belongs to the universal ribosomal protein uL16 family.
   
   0.769
SSCI68780.1
Related to 50S ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.765
SSCI78190.1
Related to MRPL10-mitochondrial ribosomal protein, large subunit.
   
   0.764
SSCI00400.1
Related to MRPL17-mitochondrial ribosomal protein, large subunit.
   
   0.760
SSCI82030.1
Uncharacterized protein.
   
   0.760
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.