STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI34610.1Probable RPN8-26S proteasome regulatory subunit. (329 aa)    
Predicted Functional Partners:
SSCI26400.1
Probable RPT6-26S proteasome regulatory subunit; Belongs to the AAA ATPase family.
   
 0.999
SSCI38060.1
PCI domain-containing protein.
   
 0.999
SSCI37450.1
Probable 26S proteasome non-atpase regulatory subunit Rpn6.
   
 0.999
SSCI43470.1
26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.999
SSCI47480.1
Probable RPT1-26S proteasome regulatory subunit; Belongs to the AAA ATPase family.
   
 0.999
SSCI79830.1
Probable 26S proteasome regulatory subunit Rpn10.
   
 0.999
SSCI80450.1
Probable RPT3-26S proteasome regulatory subunit; Belongs to the AAA ATPase family.
   
 0.999
SSCI31430.1
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.999
SSCI31480.1
Uncharacterized protein.
   
 0.999
SSCI26810.1
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.999
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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