STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI70180.1Probable DPS1-aspartyl-tRNA synthetase, cytosolic. (561 aa)    
Predicted Functional Partners:
SSCI43440.1
GatB_Yqey domain-containing protein.
 
 0.984
SSCI02080.1
Probable MES1-methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.949
SSCI04330.1
Probable proline-tRNA ligase.
  
 0.942
SSCI62710.1
AA_TRNA_LIGASE_II domain-containing protein.
  
0.930
SSCI09150.1
Probable glutamine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.921
SSCI36530.1
Related to Tyrosyl-tRNA synthetase.
  
 0.919
SSCI14020.1
Probable CDC60-leucine--tRNA ligase, cytosolic.
  
 0.918
SSCI02940.1
Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily.
  
 0.917
SSCI17690.1
Probable ILS1-isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.917
SSCI52960.1
Related to aspartate-tRNA ligase.
  
  
 
0.895
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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