STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI45690.1Uncharacterized protein. (95 aa)    
Predicted Functional Partners:
SSCI83950.1
Uncharacterized protein.
   
 
 0.962
SSCI46240.1
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 
 0.959
SSCI16300.1
TPR_REGION domain-containing protein.
    
 
 0.950
SSCI79560.1
annotation not available
    
 
 0.950
SSCI25970.1
DUF2012 domain-containing protein.
   
 
 0.947
SSCI75490.1
Uncharacterized protein.
   
 
 0.923
SSCI75480.1
Uncharacterized protein.
   
 
 0.923
SSCI07020.1
MPN domain-containing protein.
    
 
 0.908
SSCI65940.1
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
      
 0.408
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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