STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI85150.1MIT domain-containing protein. (1431 aa)    
Predicted Functional Partners:
SSCI65820.1
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 
 0.948
SSCI70210.1
Related to MRPL32-mitochondrial ribosomal protein of the large subunit.
  
 
 0.941
SSCI38660.1
Ribosomal_L18_c domain-containing protein.
   
 
 0.938
SSCI04010.1
Uncharacterized protein.
   
 
 0.936
SSCI27810.1
Related to MRPS9-mitochondrial ribosomal protein, small subunit.
  
 
 0.934
SSCI75970.1
Probable 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.932
SSCI62420.1
Related to 50S ribosomal protein L19.
  
 
 0.912
SSCI23940.1
Related to mitochondrial ribosomal protein YmL8; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.909
SSCI01100.1
Uncharacterized protein.
    
 
 0.909
SSCI49170.1
Uncharacterized protein.
  
 
 0.909
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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