STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI47830.1Uncharacterized protein. (245 aa)    
Predicted Functional Partners:
SSCI79640.1
Related to translation elongation factor eEF1, gamma chain.
    
 0.884
SSCI40250.1
Uncharacterized protein.
    
 0.741
SSCI62630.1
Probable thioredoxin peroxidase.
   
 0.741
SSCI61690.1
Uncharacterized protein.
   
 0.741
SSCI48090.1
Related to glutathione-S-transferase; Belongs to the GST superfamily.
   
 0.738
SSCI00380.1
Glutathione synthetase.
   
 0.711
SSCI79180.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 
 0.704
SSCI07110.1
GST N-terminal domain-containing protein.
   
 0.669
SSCI06680.1
GST N-terminal domain-containing protein.
   
 0.669
SSCI17360.1
Uncharacterized protein; Belongs to the GST superfamily.
    
 0.661
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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