STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI36590.1Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family. (796 aa)    
Predicted Functional Partners:
SSCI59970.1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.990
SSCI15980.1
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.987
SSCI83030.1
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.986
SSCI15970.1
Probable IDH1-isocitrate dehydrogenase [NAD] subunit 1, mitochondrial.
  
 0.983
SSCI70050.1
Isocitrate lyase.
  
 0.955
SSCI69210.1
Probable KGD1-alpha-ketoglutarate dehydrogenase.
   
 
 0.949
SSCI18910.1
Uncharacterized protein.
  
 0.940
SSCI76390.1
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
 0.937
SSCI33490.1
Uncharacterized protein.
  
 0.914
SSCI28720.1
Probable NADH dehydrogenase (Ubiquinone) 49K chain; Belongs to the complex I 49 kDa subunit family.
   
 
 0.914
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.