STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI51900.1Uncharacterized protein. (405 aa)    
Predicted Functional Partners:
SSCI20440.1
Uncharacterized protein.
 
      0.767
SSCI45780.1
Uncharacterized protein.
   
  
 0.690
SSCI58940.1
Proteasome subunit beta; Belongs to the peptidase T1B family.
 
      0.662
SSCI49450.1
Uncharacterized protein.
   
    0.626
SSCI78180.1
Uncharacterized protein.
   
   0.615
SSCI78170.1
Uncharacterized protein.
   
   0.615
SSCI17800.1
Related to ENP1-required for pre-rRNA processing and 40S ribosomal subunit synthesis.
   
    0.607
SSCI03200.1
Uncharacterized protein.
   
    0.604
SSCI15790.1
Probable IMP4-component of the U3 small nucleolar ribonucleoprotein.
   
    0.598
SSCI02850.1
Related to NOC4-nucleolar protein, mediates maturation and nuclear export of 40S ribosomal subunits.
   
    0.598
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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