STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI81580.1PigN domain-containing protein. (960 aa)    
Predicted Functional Partners:
SSCI12140.1
Uncharacterized protein.
    
 0.916
SSCI56700.1
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
   
 0.903
SSCI81590.1
PigN domain-containing protein.
 
     0.880
SSCI58790.1
Lysophospholipase.
   
 
 0.776
SSCI64290.1
Probable PHO81-cyclin-dependent kinase inhibitor.
  
 0.770
SSCI50590.1
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
    
 0.744
SSCI26560.1
Uncharacterized protein.
    
 0.701
SSCI27320.1
Uncharacterized protein.
    
 0.646
SSCI55320.1
Related to ERV25-component of the COPII-coated vesicles.
    
   0.633
SSCI42620.1
Related to Phosphopantothenoylcysteine decarboxylase.
    
  0.615
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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