STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI41390.1Rab-GAP TBC domain-containing protein. (710 aa)    
Predicted Functional Partners:
SSCI83100.1
Probable YPT6-GTP-binding protein of the rab family.
    
 0.785
SSCI82050.1
Probable GTP-binding protein ypt1.
    
 0.714
SSCI73680.1
Uncharacterized protein.
    
 
 0.702
SSCI77510.1
BAR domain-containing protein.
    
 
 0.682
SSCI20380.1
ABC1 domain-containing protein.
 
      0.681
SSCI14640.1
Probable GTP-binding protein ypt5.
    
 0.646
SSCI62620.1
Related to GTP-binding protein Rab5c.
    
 0.646
SSCI29400.1
MBOAT_2 domain-containing protein.
   
  0.604
SSCI33420.1
MBOAT_2 domain-containing protein.
   
  0.604
SSCI74100.1
Uncharacterized protein.
   
  0.604
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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