STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI41660.1GH16 domain-containing protein. (1199 aa)    
Predicted Functional Partners:
SSCI41650.1
Related to glycosyl transferase, group 2 family protein.
  
  0.659
SSCI52890.1
Uncharacterized protein.
  
  0.642
SSCI58000.1
Uncharacterized protein.
    
 0.577
SSCI32330.1
Probable BMH1-14-3-3 protein epsilon; Belongs to the 14-3-3 family.
    
 0.547
SSCI49590.1
Uncharacterized protein; Belongs to the SKP1 family.
    
  0.541
SSCI46650.1
Related to integral peroxisomal membrane protein.
    
 0.523
SSCI27930.1
Related to transcription factor TFIIIC subunit.
    
 0.514
SSCI67690.1
Uncharacterized protein.
    
 0.512
SSCI26860.1
Uncharacterized protein.
    
  0.508
SSCI32470.1
Uncharacterized protein.
    
 0.507
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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