STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI58020.1Uncharacterized protein. (203 aa)    
Predicted Functional Partners:
SSCI17510.1
Uncharacterized protein.
     
 0.619
SSCI06990.1
annotation not available
     
 0.619
SSCI35450.1
Uncharacterized protein.
     
 0.608
SSCI83100.1
Probable YPT6-GTP-binding protein of the rab family.
     
 0.573
SSCI35470.1
Uncharacterized protein.
     
 0.570
SSCI82880.1
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
     
 0.568
SSCI52740.1
Uncharacterized protein.
     
 0.555
SSCI52750.1
Uncharacterized protein.
     
 0.555
SSCI65130.1
Uncharacterized protein.
      
 0.424
SSCI32560.1
Uncharacterized protein.
      
 0.422
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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