STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI42880.1Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (263 aa)    
Predicted Functional Partners:
SSCI09570.1
Uncharacterized protein.
    
 0.987
SSCI42870.1
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
 
     0.937
SSCI17150.1
Related to TLG2-member of the syntaxin family of t-SNAREs; Belongs to the syntaxin family.
    
 
 0.933
SSCI24730.1
t-SNARE coiled-coil homology domain-containing protein.
   
 
 0.910
SSCI21900.1
Uncharacterized protein.
 
      0.900
SSCI34290.1
Related to MTO1 protein involved in mitochondrial tRNA modification.
 
      0.900
SSCI65070.1
Related to syntaxin family member TLG1.
    
 
 0.898
SSCI57290.1
Related to DigA protein.
    
 0.802
SSCI82880.1
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
 0.797
SSCI14640.1
Probable GTP-binding protein ypt5.
 
  
 0.785
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.