STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI55720.1Uncharacterized protein. (491 aa)    
Predicted Functional Partners:
SSCI55710.1
ATG11 domain-containing protein.
 
  
   0.846
SSCI55690.1
Uncharacterized protein.
 
  
   0.762
SSCI32350.1
Alpha_adaptin_C domain-containing protein.
    
  0.515
SSCI55700.1
Uncharacterized protein.
 
      0.506
SSCI32340.1
Adaptin_N domain-containing protein.
    
  0.474
SSCI62420.1
Related to 50S ribosomal protein L19.
    
   0.457
SSCI68980.1
Related to MRP4-mitochondrial ribosomal protein, small subunit; Belongs to the universal ribosomal protein uS2 family.
    
   0.450
SSCI78190.1
Related to MRPL10-mitochondrial ribosomal protein, large subunit.
   
   0.449
SSCI62780.1
Related to Superoxide dismutase.
   
   0.447
SSCI46480.1
Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.
    
 
 0.446
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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