STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI68210.1Uncharacterized protein. (881 aa)    
Predicted Functional Partners:
SSCI69000.1
ABC transmembrane type-1 domain-containing protein.
 
   
  0.929
SSCI68220.1
ABC transmembrane type-1 domain-containing protein.
 
      0.899
SSCI47140.1
Probable ATP-binding cassette transporter protein, mitochondrial.
  
 
0.614
SSCI13250.1
Acetyl-CoA carboxylase.
   
 0.605
SSCI66560.1
Ubiquitin carboxyl-terminal hydrolase.
    
  0.604
SSCI37470.1
annotation not available
  
 
0.596
SSCI43020.1
Uncharacterized protein.
  
  
0.591
SSCI09020.1
Uncharacterized protein.
  
  
 
0.590
SSCI05400.1
ABC transporter domain-containing protein.
  
  
 
0.578
SSCI53820.1
Probable clathrin-associated adaptor complex medium chain; Belongs to the adaptor complexes medium subunit family.
    
  0.562
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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