STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI73890.1Fungal_trans domain-containing protein. (852 aa)    
Predicted Functional Partners:
SSCI33520.1
Probable cytochrome b5; Belongs to the cytochrome b5 family.
    
 0.815
SSCI86070.1
Nitrate reductase.
    
 0.815
SSCI63470.1
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.663
SSCI12000.1
Related to EMG1-Protein required for ribosome biogenesis.
    
  0.661
SSCI47410.1
Probable FCF1-putative PINc domain nuclease.
    
  0.661
SSCI64290.1
Probable PHO81-cyclin-dependent kinase inhibitor.
    
 0.661
SSCI46370.1
Related to SOF1-involved in 18S pre-rRNA production.
    
  0.661
SSCI02850.1
Related to NOC4-nucleolar protein, mediates maturation and nuclear export of 40S ribosomal subunits.
    
  0.661
SSCI65940.1
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.661
SSCI38180.1
KH domain-containing protein.
    
  0.661
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.