STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI21540.1Probable PEX1-peroxisomal assembly protein-peroxin. (1156 aa)    
Predicted Functional Partners:
SSCI79880.1
Related to PEX6-peroxisomal assembly protein.
  
0.997
SSCI86590.1
Related to peroxisomal membrane protein pex13.
    
 0.934
SSCI25420.1
Related to Peroxisome assembly protein 12.
    
 0.930
SSCI29380.1
Related to PEX14-peroxisomal protein involved in protein import-peroxin.
    
 0.926
SSCI76090.1
Uncharacterized protein.
   
 0.898
SSCI14160.1
Uncharacterized protein.
   
 0.890
SSCI03070.1
Probable SEC17-transport vesicle fusion protein.
    
 0.866
SSCI61030.1
Uncharacterized protein.
    
 0.866
SSCI51370.1
MPN domain-containing protein.
    
 0.866
SSCI82480.1
Related to PEX19-required for biogenesis of peroxisomes (Peroxin).
    
 0.861
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.