STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI37620.1Uncharacterized protein. (146 aa)    
Predicted Functional Partners:
SSCI60640.1
Related to mRNA export factor mex67.
    
 0.604
SSCI55420.1
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.578
SSCI82080.1
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.578
SSCI09410.1
Related to histone acetyltransferase.
    
 0.578
SSCI58000.1
Uncharacterized protein.
    
 0.577
SSCI31230.1
Spc7 domain-containing protein.
    
 0.575
SSCI28200.1
Uncharacterized protein.
    
 0.575
SSCI24850.1
PH domain-containing protein.
    
 0.575
SSCI06790.1
Probable transcriptional coregulator Snw1.
    
  0.573
SSCI32330.1
Probable BMH1-14-3-3 protein epsilon; Belongs to the 14-3-3 family.
    
 0.547
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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