STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI06720.1Related to thiamine-phosphate diphosphorylase / hydroxyethylthiazole kinase. (566 aa)    
Predicted Functional Partners:
SSCI01550.1
annotation not available
 
 
 0.977
SSCI10510.1
Probable LTP1-protein-tyrosine-phosphatase.
    
  0.895
SSCI62940.1
Related to Thiamine-repressible acid phosphatase; Belongs to the histidine acid phosphatase family.
     
 0.853
SSCI10550.1
Uncharacterized protein.
    
 0.853
SSCI67940.1
Alkaline phosphatase.
   
 
 0.845
SSCI01110.1
Alkaline phosphatase.
   
 
 0.845
SSCI31580.1
Probable ubiquitin.
    
 0.737
SSCI70680.1
Uncharacterized protein.
    
 0.737
SSCI31900.1
Probable ubiquitin/ribosomal protein S27a fusion protein.
    
 0.737
SSCI36170.1
Uncharacterized protein.
    
 0.724
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.