STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI60330.1Uncharacterized protein. (1169 aa)    
Predicted Functional Partners:
SSCI04690.1
MI domain-containing protein.
    
 0.951
SSCI40110.1
Probable CDC40-Pre-mRNA splicing factor important for catalytic step II.
    
 0.951
SSCI25100.1
Probable Small nuclear ribonucleoprotein F.
    
 0.937
SSCI70080.1
Related to Cell cycle control protein cwf25.
   
 0.936
SSCI35700.1
Sm domain-containing protein.
    
 0.934
SSCI37410.1
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.933
SSCI20540.1
Slu7 domain-containing protein.
    
 0.933
SSCI43530.1
Small nuclear ribonucleoprotein Sm D2.
    
 0.933
SSCI42530.1
Small nuclear ribonucleoprotein Sm D3.
    
  0.927
SSCI10090.1
Related to CEF1-required during G2/M transition.
   
 
 0.902
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.