STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI22270.1Uncharacterized protein. (425 aa)    
Predicted Functional Partners:
SSCI10370.1
MI domain-containing protein.
   
 0.986
SSCI71050.1
Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 
 0.985
SSCI83240.1
RRM domain-containing protein.
 
 
 0.983
SSCI62250.1
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.982
SSCI64790.1
Probable SUI2-translation initiation factor eIF-2 alpha chain.
   
 0.970
SSCI69860.1
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 
 0.970
SSCI63470.1
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.969
SSCI80030.1
WD_REPEATS_REGION domain-containing protein.
   
 
 0.965
SSCI65950.1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
 
 
 0.957
SSCI69930.1
Probable EFT2-translation elongation factor eEF2.
   
 0.951
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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