STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI48360.1HECT domain-containing protein. (999 aa)    
Predicted Functional Partners:
SSCI63590.1
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.868
SSCI79830.1
Probable 26S proteasome regulatory subunit Rpn10.
    
 
 0.856
SSCI67560.1
HECT domain-containing protein.
     
 0.801
SSCI10550.1
Uncharacterized protein.
   
 0.795
SSCI82250.1
Uncharacterized protein.
    
 0.788
SSCI19690.1
Rap-GAP domain-containing protein.
    
 0.782
SSCI67180.1
Probable ubiquitin--protein ligase hus5; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.776
SSCI09480.1
Probable RAD6-E2 ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.772
SSCI13570.1
Probable ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.769
SSCI19180.1
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.763
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.