STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI11480.1Uncharacterized protein. (870 aa)    
Predicted Functional Partners:
SSCI09060.1
Telo_bind domain-containing protein.
    
 0.764
SSCI15650.1
3'-5' exonuclease domain-containing protein.
    
 0.739
SSCI49360.1
AAA_23 domain-containing protein.
    
 0.730
SSCI40670.1
Related to MRE11-DNA repair and meiotic recombination protein.
    
  0.699
SSCI19120.1
Small G-protein Ras1.
    
 0.687
SSCI04540.1
Probable RSR1-GTP-binding protein.
    
 0.687
SSCI60140.1
Small G-protein Ras2.
    
 0.687
SSCI26430.1
Probable small G-protein Ras2.
    
 0.687
SSCI54150.1
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
    
 0.645
SSCI14920.1
Probable ras-related GTP-binding protein.
    
 0.645
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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