STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI17780.1Related to Ribonucleases P/MRP protein subunit POP1. (1036 aa)    
Predicted Functional Partners:
SSCI64150.1
Related to POP4-protein involved in processing of tRNAs and rRNAs.
   
 0.999
SSCI54790.1
Related to Ribonuclease P protein subunit p30.
   
 0.998
SSCI76050.1
Uncharacterized protein.
    
 0.998
SSCI14910.1
Uncharacterized protein.
    
 0.991
SSCI75900.1
Uncharacterized protein.
   
  0.975
SSCI41810.1
Related to KRI1-KRRI-Interacting protein 1.
   
  0.946
SSCI11030.1
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
    
 0.890
SSCI74320.1
Uncharacterized protein.
   
 
 0.776
SSCI55880.1
Probable Pyridoxine biosynthesis protein PDX1; Belongs to the PdxS/SNZ family.
     
 0.729
SSCI16070.1
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 0.650
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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