STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI18870.1Uncharacterized protein. (814 aa)    
Predicted Functional Partners:
SSCI51370.1
MPN domain-containing protein.
   
 0.998
SSCI36510.1
Uncharacterized protein.
   
 0.998
SSCI61030.1
Uncharacterized protein.
    
 0.995
SSCI72650.1
Uncharacterized protein.
    
 0.989
SSCI33130.1
Related to OTU1-deubiquitylation enzyme.
   
 0.987
SSCI58480.1
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.986
SSCI41670.1
Related to Sel-1 homolog.
    
 0.985
SSCI26610.1
Uncharacterized protein.
   
 0.984
SSCI21770.1
Proteasome subunit beta.
   
 0.977
SSCI86220.1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.973
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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