STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI58600.1MRP-S28 domain-containing protein. (143 aa)    
Predicted Functional Partners:
SSCI26930.1
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 0.991
SSCI82860.1
Related to ribosomal protein YmS18, mitochondrial.
   
 0.981
SSCI05020.1
Uncharacterized protein.
   
 0.978
SSCI58740.1
Related to RSM10-mitochondrial ribosomal protein, small subunit.
   
 0.977
SSCI46480.1
Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.
   
 0.975
SSCI62380.1
Uncharacterized protein.
   
 0.975
SSCI68980.1
Related to MRP4-mitochondrial ribosomal protein, small subunit; Belongs to the universal ribosomal protein uS2 family.
   
 0.973
SSCI49170.1
Uncharacterized protein.
   
 0.972
SSCI27810.1
Related to MRPS9-mitochondrial ribosomal protein, small subunit.
   
 0.972
SSCI62200.1
Related to RSM7-mitochondrial ribosomal protein, small subunit.
   
 0.969
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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