STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI27090.1WD_REPEATS_REGION domain-containing protein. (330 aa)    
Predicted Functional Partners:
SSCI82940.1
Uncharacterized protein.
   
 0.998
SSCI06930.1
Probable MAD2-spindle-assembly checkpoint protein.
   
 0.996
SSCI10710.1
Related to nuclear protein bimA.
    
 0.996
SSCI60180.1
Related to CDC20-cell division control protein.
   
 0.992
SSCI16990.1
ANAPC4 domain-containing protein.
    
 0.981
SSCI63560.1
Related to CDC23-cell division control protein.
   
 0.980
SSCI27160.1
Uncharacterized protein.
    
 0.975
SSCI50160.1
Cell cycle regulatory protein.
   
 0.974
SSCI79800.1
APC1_C domain-containing protein.
    
 0.963
SSCI83210.1
C2H2-type domain-containing protein.
   
 
 0.956
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.