STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI78490.1AMP-binding domain-containing protein. (167 aa)    
Predicted Functional Partners:
SSCI23930.1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.837
SSCI31860.1
Tryptophan synthase.
   
 
 0.805
SSCI59470.1
Histidine biosynthesis trifunctional protein.
   
  
 0.798
SSCI78500.1
AMP-binding domain-containing protein.
 
      0.742
SSCI78540.1
NAD_binding_4 domain-containing protein.
 
      0.660
SSCI40750.1
NAD_binding_4 domain-containing protein.
 
      0.645
SSCI78520.1
Uncharacterized protein.
 
      0.608
SSCI62800.1
Ketoacyl-synt_C domain-containing protein.
   
 0.578
SSCI32950.1
Uncharacterized protein.
   
 0.578
SSCI62810.1
Uncharacterized protein.
   
 0.578
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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