STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI80490.1RING-type domain-containing protein. (487 aa)    
Predicted Functional Partners:
SSCI41670.1
Related to Sel-1 homolog.
   
 0.973
SSCI58480.1
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.973
SSCI26610.1
Uncharacterized protein.
    
 0.972
SSCI18870.1
Uncharacterized protein.
    
 0.967
SSCI00900.1
Related to AFG2-ATPase of the CDC48/PAS1/SEC18 (AAA) family.
    
 0.944
SSCI84810.1
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.923
SSCI80500.1
Uncharacterized protein.
 
      0.900
SSCI37200.1
UBX domain-containing protein.
    
 
 0.892
SSCI10550.1
Uncharacterized protein.
    
 0.868
SSCI41940.1
Uncharacterized protein.
    
 0.803
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.