STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI32790.1Related to VPS17-vacuolar protein sorting-associated protein. (708 aa)    
Predicted Functional Partners:
SSCI37390.1
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.966
SSCI29980.1
Related to vacuolar protein-sorting protein VPS35.
   
 
 0.941
SSCI27580.1
Probable PEP8-vacuolar protein sorting/targeting protein.
    
 
 0.785
SSCI56230.1
Uncharacterized protein.
    
 
 0.785
SSCI57960.1
Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.
    
 0.759
SSCI50210.1
PX domain-containing protein.
    
 
 0.652
SSCI50070.1
Uncharacterized protein.
    
 0.644
SSCI42220.1
Adaptin_N domain-containing protein.
    
 0.612
SSCI78940.1
Uncharacterized protein.
    
  0.611
SSCI78950.1
ENTH domain-containing protein.
    
  0.611
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.