STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI68890.1Uncharacterized protein. (336 aa)    
Predicted Functional Partners:
SSCI64290.1
Probable PHO81-cyclin-dependent kinase inhibitor.
    
 0.988
SSCI68490.1
Related to ATP-dependent DNA helicase II, 80 kDa subunit.
    
 0.852
SSCI57260.1
Probable Cdk1-cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.
    
 0.798
SSCI60480.1
Probable PHO85-cyclin-dependent protein kinase; Belongs to the protein kinase superfamily.
    
 0.798
SSCI79120.1
Uncharacterized protein.
    
 0.784
SSCI08180.1
SAP domain-containing protein.
    
 0.758
SSCI83810.1
DNA_LIGASE_A3 domain-containing protein.
    
 0.695
SSCI59220.1
DNA ligase.
    
 0.695
SSCI73540.1
Uncharacterized protein.
    
 0.661
SSCI63570.1
Related to Progesterone 5-beta-reductase.
    
 0.661
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.