STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI64650.1Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (389 aa)    
Predicted Functional Partners:
SSCI40690.1
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
  
 
0.912
SSCI61820.1
Uncharacterized protein.
     
 0.900
SSCI50770.1
Related to COX10-farnesyl transferase.
   
 
 0.830
SSCI27480.1
Probable UBC6-E2 ubiquitin-conjugating enzyme.
 
      0.810
SSCI13280.1
Cytochrome c domain-containing protein.
   
 
 0.612
SSCI22450.1
Uncharacterized protein.
   
 
 0.597
SSCI47640.1
Probable NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial.
   
  
 0.496
SSCI85450.1
Probable NADH2 dehydrogenase (Ubiquinone) 40K chain.
   
 
 0.449
SSCI47820.1
Related to carnitine acetyl transferase FacC; Belongs to the carnitine/choline acetyltransferase family.
    
   0.426
SSCI47240.1
Related to PUF3-transcript-specific regulator of mRNA degradation.
    
   0.418
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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