STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI74100.1Uncharacterized protein. (993 aa)    
Predicted Functional Partners:
SSCI14640.1
Probable GTP-binding protein ypt5.
    
 0.907
SSCI62620.1
Related to GTP-binding protein Rab5c.
    
 0.884
SSCI37390.1
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.757
SSCI10550.1
Uncharacterized protein.
    
 0.738
SSCI37450.1
Probable 26S proteasome non-atpase regulatory subunit Rpn6.
    
 0.712
SSCI64290.1
Probable PHO81-cyclin-dependent kinase inhibitor.
    
 0.705
SSCI31590.1
Myosin V; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.699
SSCI58000.1
Uncharacterized protein.
    
 0.694
SSCI19000.1
Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
    
   0.685
SSCI86230.1
Related to GTPase-activating protein beta-chimerin.
    
 0.681
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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