STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI79350.1Glyco_hydro_85 domain-containing protein. (542 aa)    
Predicted Functional Partners:
SSCI10550.1
Uncharacterized protein.
     
 0.683
SSCI31580.1
Probable ubiquitin.
     
 0.589
SSCI70680.1
Uncharacterized protein.
     
 0.589
SSCI31900.1
Probable ubiquitin/ribosomal protein S27a fusion protein.
     
 0.589
SSCI80290.1
Alpha-mann_mid domain-containing protein.
  
  
 0.580
SSCI80280.1
Glyco_hydro38C2 domain-containing protein.
  
  
 0.580
SSCI82250.1
Uncharacterized protein.
     
 0.570
SSCI74700.1
Related to BOI1-BEM1 protein-binding protein.
     
 0.570
SSCI44230.1
Ubiquitin-like domain-containing protein.
     
 0.570
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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