STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI63650.1Related to COP9 signalosome complex subunit 6. (355 aa)    
Predicted Functional Partners:
SSCI00050.1
Probable COP9 signalosome complex subunit 2.
   
 0.998
SSCI26080.1
PCI domain-containing protein.
   
 0.998
SSCI66290.1
MPN domain-containing protein.
   
 0.998
SSCI19890.1
Uncharacterized protein.
   
 0.997
SSCI31440.1
Related to COP9 signalosome complex subunit 1.
  
 0.997
SSCI29530.1
PCI domain-containing protein.
    
 0.991
SSCI44230.1
Ubiquitin-like domain-containing protein.
   
 0.984
SSCI44890.1
PCI domain-containing protein.
   
 0.967
SSCI31480.1
Uncharacterized protein.
   
 0.957
SSCI79830.1
Probable 26S proteasome regulatory subunit Rpn10.
   
 0.953
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.